Appendix A

Lista completa de todos los trabajos dinámica poblacional en orquídea que han usado matriz

En esta sección se hará recopilación de los estudios de dinámica poblacional en orquídeas que han usado matrices de transición de estados y de edades. Se identifica algunos de los temas principales de los trabajos.

En la siguiente tabla se presentan los estudios de dinámica poblacional en orquídeas que usaron PPM y la(s) preguntas principales que los autores intentaron responder. En la gran mayoría de los trabajos se evalúa múltiples hipótesis/ideas sobre la dinámica poblacional de las orquídeas. Para información especifica sobre la metodología usada en cada estudio, se recomienda revisar los trabajos originales.

• Clave de las variables

  • Riesgo: Si se evaluó el riesgo de extinción de la especie.
  • Variación espacial: Si se evaluó la variación espacial de la especie.
  • Variación temporal: Si se evaluó la variación temporal de la especie.
  • Latencia: Si se evaluó la importancia de la latencia (Dormancy) de la especie.
  • Métodos de estimación de parametros: Si se evaluó métodos alternos de estimación de parametros (no tradicional).
  • Historia de Vida: Si se evaluó la historia de vida de la especie en un contexto evolutivo.
  • Otro: Si se evaluó otra pregunta no incluida en las anteriores.
  • Referencia: Referencia del estudio.

library(readr)
library(dplyr)
library(gt)
library(flextable)
library(ftExtra)

Notas para añadir a la tabla

• IPM - Integrated Population Model
• Transient dynamics
• Transfer function

Genero	Especies	Riesgo	Var esp.	Var temp	Lat	Est param	Hist vida	Otro	Ref
Aspasia	principissa	Si		Si					Zotz and Schmidt (2006)
Brasavolla	cucullata	Si	Si	Si				IPM Transient Dynamics Transfer Function	Ackerman et al. (2020)
Broughtonia	cubensis	Si	Si	Si				Transient Dynamics	Raventós et al. (2021)
Caladenia	amoena	Si			Si	Si	Si	Selección de modelos, Método de estimar latencia	R. Tremblay et al. (2009b) R. Tremblay et al. (2009a)
Caladenia	argocalla	Si			Si	Si	Si	Selección de modelos, Método de estimar latencia	R. Tremblay et al. (2009b) R. Tremblay et al. (2009a)
Caladenia	clavigera	Si			Si	Si	Si	Selección de modelos, Método de estimar latencia	R. Tremblay et al. (2009b) R. Tremblay et al. (2009a)
Caladenia	elegans	Si			Si	Si	Si	Selección de modelos, Método de estimar latencia	R. Tremblay et al. (2009b) R. Tremblay et al. (2009a)
Caladenia	graniticola	Si			Si	Si	Si	Selección de modelos, Método de estimar latencia	R. Tremblay et al. (2009b) R. Tremblay et al. (2009a)
Caladenia	macroclavia	Si			Si	Si	Si	Selección de modelos, Método de estimar latencia	R. Tremblay et al. (2009b) R. Tremblay et al. (2009a)
Caladenia	oenochila	Si			Si	Si	Si	Selección de modelos, Método de estimar latencia	R. Tremblay et al. (2009b) R. Tremblay et al. (2009a)
Caladenia	rosella	Si			Si	Si	Si	Selección de modelos, Método de estimar latencia	R. Tremblay et al. (2009b) R. Tremblay et al. (2009a)
Caladenia	valida	Si			Si	Si	Si	Selección de modelos, Método de estimar latencia	R. Tremblay et al. (2009b) R. Tremblay et al. (2009a)
Caladenia	orientalis	Si	Si	Si	Si			Interacciones abiotica, Alondra	F. Coates and Duncan (2009)
Cephalanthera	longifolia				Si	Si	Si	Interacciones abiótica y biótica	Shefferson et al. (2012)
Cleistes	divaricata var. divaricata	Si	Si	Si	Si	Si			Gregg (1991)
Cleistes	divaricata var. bifaria	Si	Si	Si	Si	Si			Gregg (1991)
Cleistes	bifaria		Si		Si			Estructura de tamaño y estado	Gregg and Kéry (2006)
Corallorhiza	trifida	Si		Si	Si				Iriondo Alegria et al. (2009)
Crepidium	acuminatum	Si		Si				Efecto de cosecha, Diana	Timsina et al. (2021)
Cypripedium	acaule					Si		Leslie matrix, Javielise	Cochran and Ellner (1992)
Cypripedium	calceolus	Si	Si	Si	Si			Selección de modelos	Nicolè, Brzosko, and TILL-BOTTRAUD (2005)
Cypripedium	calceolus	Si	Si	Si	Si			Efecto de aislamiento	Garcı́a, Goni, and Guzmán (2010)
Cypripedium	calceolus							Costo de latencia, Interacciones abiótica y biótica	Shefferson et al. (2012)
Cypripedium	fasciculatum	Si	Si	Si	Si			Selección de modelos, Interacciones abióticas	Thorpe et al. (2011)
Cypripedium	parviflorum				Si		Si		Shefferson, Warren, and Pulliam (2014)
Cypripedium	reginae		Si		Si		Si	Selección de modelos, Interaccione bióticas	Kéry and Gregg (2004)
Cypripedium	lentiginosum					Si		Leslie matrix	Zhongjian et al. (2008)
Dactylorhiza	hatagirea	Si	Si	Si	Si			Efecto de cosecha, Gabriela	Chapagain et al. (2021)
Dactylorhiza	lapponica		Si	Si	Si			Efecto antropogénico, Interaccione abióticas	Sletvold, Øien, and Moen (2010) Sletvold et al. (2013)
Dendrophylax	lindenii	Si		Si				Efecto de densidad	González-Hernández (2009) Raventós et al. (2015)
Epidendrum	xanthinum	Si	Si					Tremblay	Farfán Camargo (2008)
Epipactis	atrorubens	Si	Si	Si	Si			Incorporación de variable de endogamía	Hens et al. (2017)
Epipactis	atrorubens								jakalaniemi2011orchids
Erycina	crista-galli	Si	Si					Aucencia	Mondragón, Maldonado, and Aguilar-Santelises (2007)
Erycina	crista-galli								Maldonado Flores (2005)
Guarianthe	aurantiaca	Si	Si					Efecto de cosecha	Mondragón (2009)
Herminium	monorchis	Si		Si	Si			Efecto abiótico	Wells et al. (1998)
Himantoglossum	hircinum	Si		Si				Efecto abiótico: sequia	Wells et al. (1998)
Himantoglossum	hircinum	Si		Si				Modelando expanción	Carey (1998)
Himantoglossum	hircinum	Si		Si	Si			Efecto abiótico: Precipitación y Temp del suelo	Pfeifer and Jetschke (2006)
Isotria	medeoloides	Si		Si				Nayliz	Dibble et al. (2019)
Jacquiniella	leucomelana	Si		Si				Metapopulation approach	Winkler, Hülber, and Hietz (2009)
Jacquiniella	teretifolia	Si		Si				Metapopulation approach	Winkler, Hülber, and Hietz (2009)
Laelia	autumnalis	Si	Si	Si			Efecto de cosecha to be digitized	Aucencia	Emeterio-Lara et al. (2021)
Laelia	speciosa	Si		Si				Efecto de cosecha, Mariana	Hernández-Apolinar (1992)
Lepanthes	caritensis	Si	Si	Si					R. L. Tremblay (1997)
Lepanthes	caritensis	Si	Si	Si				Efecto de huracanes	Crain, Tremblay, and Ferguson (2019)
Lepanthes	eltoroensis	Si	Si					Tamaño efectivo de Población, Ne y largo de vida	R. Tremblay and Ackerman (2001)
Lepanthes	eltoroensis	Si	Si	Si					R. Tremblay and Hutchings (2003)
Lepanthes	eltoroensis	Si	Si	Si	Si			Nueva metodología de estimar parametros	tremblay2021population
Lepanthes	rubripetala							Tamaño efectivo de Población, Ne y largo de vida	R. Tremblay and Ackerman (2001)
Lepanthes	rubripetala	Si	Si	Si				Dinamica de transiciones	R. Tremblay, Raventos, and Ackerman (2015)
Lepanthes	rupestris							Tamaño efectivo de Población, Ne y largo de vida	R. Tremblay and Ackerman (2001)
Lepanthes	acuminata	Si						Dinamica de transiciones	Raventós et al. (2018)
Lycaste	aromatica	Si		Si				Metapopulation approach	Winkler, Hülber, and Hietz (2009)
Neotinea	ustulata	Si	Si		Si		Si	Metodo de estimar latencia, Tremblay	Shefferson and Tali (2007)
Oeceoclades	maculata	Si	Si	Si				Especie invasiva	Riverón-Giró et al. (2019)
Oncidium	poikilostalix	Si						Dinamica de transiciones	Raventós et al. (2018)
Orchis	purpurea	Si		Si				LTRE	Jacquemyn, Brys, and Jongejans (2010)
Orchis	ustulata	Si	Si					See Neotinea ustulata	Tali (2002)
Phaius	australis	Si	Si					Efecto abiótico	CL (2016)
Platanthera	hookeri	Si	Si						Reddoch and Reddoch (2007)
Platanthera	praeclara	Si	Si	Si	Si			Variación temporal	Sieg and King (1995)
Platanthera	macrophylla	Si	Si	Si				Incluye estado de protocormo, needs digitizing	Cleavitt et al. (2017) Berry and Cleavitt (2021)
Platanthera	orbiculata	Si	Si	Si				Incluye estado de protocormo, needs digitizing	Cleavitt et al. (2017) Berry and Cleavitt (2021)
Prasophyllum	correctum	Si		Si	Si			Efecto de fuego, Nayliz	Fiona Coates, Lunt, and Tremblay (2006)
Pseudorchis	albida								Štípková (2013)
Rodriguezia	granadensis	Si	Si	Si			Javeilise	Efecto antropogénico	Ospina-Calderón et al. (2023)
Serapias	cordigera	Si	Si	Si	Si			Efecto antropogénico	Pellegrino and Bellusci (2014)
Spathoglottis	plicata	Si	Si	Si				Orquídea invasiva y interacciones bióticas	Falcón, Ackerman, and Tremblay (2017)
Spiranthes	delitescens	Si	Si	Si	Si			Efecto abiótico: sequia	McClaran and Sundt (1992)
Spiranthes	parskii	Si						Efecto abiótico: herbivoría	Wonka (2010)
Telipogon	helleri	Si					Si	Dinámica de transición	Raventós et al. (2018)
Tolumnia	variegata	Si	Si	Si			Efecto	El costo de reproducción	Calvo (1993)
Trichocentrum	undulatum						Gabriela	Efecto de aislamiento	Borrero et al. (2023)

---

Lista parcial de especies de orquídeas que han sido estudiadas que no incluye matrices

.

Genero	Especies	Riesgo	Var esp.	Var temp	Lat	Est param	Hist vida	Otro	Ref
Isotria	medeoloides							no matrix	Alahuhta et al. (2017)
Cyclopogon	luteoalbus							no matrix	Juárez, Montaña, and Franco (2014)
Cypripedium	calceolus							no matrix	Davison et al. (2013)
Cypripedium	candidum							no matrix	Shefferson, Mizuta, and Hutchings (2017)
Gymnadenia	conopsea							no matrix	Øien and Moen (2002)
Ophrys	sphegodes							no matrix	Hutchings (2010)
Ophrys	sphegodes							no matrix	Shefferson, Mizuta, and Hutchings (2017)
Orchis	morio							no matrix	Wells et al. (1998)
Spiranthes	spiralis							no matrix	Jacquemyn et al. (2007)

Fecha de actualización: 2024-09-30

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